Andres M. Gomez Publications

Refereed Articles

Vlckova, K., B. Pafco, K.J. Petrzelkova, D. Modrý, A. Todd, C.J. Yeoman, M. Torralba, et al. 2018. Relationships between gastrointestinal parasite infections and the fecal microbiome in free-ranging western lowland gorillas. Frontiers in Microbiol. 9. frontiersin.org: 1202.

Brinkac L, Voorhies A, Gomez A, Nelson KE. 2017. The threat of antimicrobial resistance on the human microbiome. Microb. Ecol. [Internet]. 2017 May 11; Available from: http://dx.doi.org/10.1007/s00248-017-0985-z PMID: 28492988.

Clarke TH, Gomez A, Singh H, Nelson KE, Brinkac LM. 2017. Integrating the microbiome as a resource in the forensics toolkit. Forensic Sci. Int. Genet. 2017 Sep;30:141-147. PMID: 28728057.

Gomez A. 2017. Loss of gut microbiome diversity in industrialized societies: Alternative views (comment on DOI 10.1002/bies.201600145). Bioessays [Internet]. 2017 Mar;39(3). Available from: http://dx.doi.org/10.1002/bies.201700005 PMID: 28169429.

Gomez A, Espinoza JL, Harkins DM, Leong P, Saffery R, Bockmann M, Torralba M, Kuelbs C, Kodukula R, Inman J, Hughes T, Craig JM, Highlander SK, Jones MB, Dupont CL, Nelson KE.  2017. Host genetic control of the oral microbiome in health and disease. Cell Host Microbe. Elsevier; 2017 Sep 13;22(3):269-278.e3. PMID: 28910633.

Gomez A, Nelson KE. 2017. The oral microbiome of children: Development, disease, and implications beyond oral health. Microb. Ecol. 2017 Feb;73(2):492-503. PMCID: PMC5274568.

Torralba MG, Franks JS, Gomez A, Yooseph S, Nelson KE, Grimes DJ. 2017. Effect of Macondo Prospect 252 oil on microbiota associated with Pelagic Sargassum in the Northern Gulf of Mexico. Microb. Ecol. 2017 Jan;73(1):91-100. PMID: 27815589.

Vlčková K, Shutt-Phillips K, Heistermann M, Pafčo B, Petrželková KJ, Todd A, Modrý D, Nelson KE, Wilson BA, Stumpf RM, White BA, Leigh SR, Gomez A. 2017. Impact of stress on the gut microbiome of free-ranging western lowland gorillas. Microbiology [Internet]. 2017 Dec 5; Available from: http://dx.doi.org/10.1099/mic.0.000587 PMID: 29205130.

Wright MS, McCorrison J, Gomez AM, Beck E, Harkins D, Shankar J, Mounaud S, Segubre-Mercado E, Mojica AMR, Bacay B, Nzenze SA, Kimaro SZM, Adrian P, Klugman KP, Lucero MG, Nelson KE, Madhi S, Sutton GG, Nierman WC, Losada L. 2017. Strain level Streptococcus colonization patterns during the first year of life. Front Microbiol. 2017 Sep 6;8:1661. PMCID: PMC5592222.

Castro JJ, Gomez A, White B, Loften JR, Drackley JK. 2016. Changes in the intestinal bacterial community, short-chain fatty acid profile, and intestinal development of preweaned Holstein calves. 2. Effects of gastrointestinal site and age1. J. Dairy Sci. 2016 Dec;99(12):9703-9715.

Castro JJ, Gomez A, White BA, Mangian HJ, Loften JR, Drackley JK. 2016. Changes in the intestinal bacterial community, short-chain fatty acid profile, and intestinal development of preweaned Holstein calves. 1. Effects of prebiotic supplementation depend on site and age. J. Dairy Sci. 2016 Dec;99(12):9682-9702. PMID: 27720150.

Gomez A, Petrzelkova KJ, Burns MB, Yeoman CJ, Amato KR, Vlckova K, Modry D, Todd A, Jost Robinson CA, Remis MJ, Torralba MG, Morton E, Umaña JD, Carbonero F, Gaskins HR, Nelson KE, Wilson BA, Stumpf RM, White BA, Leigh SR, Blekhman R. 2016. Gut microbiome of coexisting BaAka pygmies and Bantu reflects gradients of traditional subsistence patterns. Cell Rep. 2016 Mar 8;14(9):2142-2153. PMID: 26923597.

Gomez A, Rothman JM, Petrzelkova K, Yeoman CJ, Vlckova K, Umaña JD, Carr M, Modry D, Todd A, Torralba M, Nelson KE, Stumpf RM, Wilson BA, Blekhman R, White BA, Leigh SR. 2016. Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp. ISME J. 2016 Feb;10(2):532. PMCID: PMC4737942.

Stumpf RM, Gomez A, Amato KR, Yeoman CJ, Polk JD, Wilson BA, Nelson KE, White BA, Leigh SR. 2016. Microbiomes, metagenomics, and primate conservation: New strategies, tools, and applications. Biol. Conserv. 2016 Jul 1;199:56-66.

Vlčková K, Gomez A, Petrželková KJ, Whittier CA, Todd AF, Yeoman CJ, Nelson KE, Wilson BA, Stumpf RM, Modrý D, White BA, Leigh SR. 2016. Effect of antibiotic treatment on the gastrointestinal microbiome of free-ranging Western lowland gorillas (Gorilla g. gorilla). Microb. Ecol. 2016 Nov;72(4):943-954. PMID: 26984253.

Amato KR, Yeoman CJ, Cerda G, Schmitt CA, Cramer JD, Miller MEB, Gomez A, Turner TR, Wilson BA, Stumpf RM, Nelson KE, White BA, Knight R, Leigh SR. 2015. Variable responses of human and non-human primate gut microbiomes to a Western diet. Microbiome. 2015 Nov 16;3:53. PMCID: PMC4645477.

Gomez A, Luckey D, Taneja V. 2015. The gut microbiome in autoimmunity: Sex matters. Clin. Immunol. 2015 Aug;159(2):154-162. PMCID: PMC4560596.

Gomez A, Petrzelkova K, Yeoman CJ, Vlckova K, Mrázek J, Koppova I, Carbonero F, Ulanov A, Modry D, Todd A, Torralba M, Nelson KE, Gaskins HR, Wilson B, Stumpf RM, White BA, Leigh SR. 2015. Gut microbiome composition and metabolomic profiles of wild western lowland gorillas (Gorilla gorilla gorilla) reflect host ecology. Mol. Ecol. 2015 May;24(10):2551-2565. PMID: 25846719.

Luckey D, Gomez A, Murray J, White B, Taneja V. 2013. Bugs and us: The role of the gut in autoimmunity. Indian J. Med. Res. 2013 Nov;138(5):732-743. PMCID: PMC3928703.

Marietta EV, Gomez AM, Yeoman C, Tilahun AY, Clark CR, Luckey DH, Murray JA, White BA, Kudva YC, Rajagopalan G. 2013. Low incidence of spontaneous type 1 diabetes in non-obese diabetic mice raised on gluten-free diets is associated with changes in the intestinal microbiome. PLoS One. 2013 Nov 13;8(11):e78687. PMCID: PMC3827256.

Yeoman CJ, Thomas SM, Miller MEB, Ulanov AV, Torralba M, Lucas S, Gillis M, Cregger M, Gomez A, Ho M, Leigh SR, Stumpf R, Creedon DJ, Smith MA, Weisbaum JS, Nelson KE, Wilson BA, White BA. 2013. A multi-omic systems-based approach reveals metabolic markers of bacterial vaginosis and insight into the disease. PLoS One. 2013 Feb 6;8(2):e56111. PMCID: PMC3566083.

Gomez A, Luckey D, Yeoman CJ, Marietta EV, Berg Miller ME, Murray JA, White BA, Taneja V. 2012. Loss of sex and age driven differences in the gut microbiome characterize arthritis-susceptible 0401 mice but not arthritis-resistant 0402 mice. PLoS One. 2012 Apr 24;7(4):e36095. PMCID: PMC3338357.

Gomez AM, Yannarell AC, Sims GK, Cadavid-Restrepo G, Moreno Herrera CX. 2011. Characterization of bacterial diversity at different depths in the Moravia Hill landfill site at Medellín, Colombia. Soil Biol. Biochem. 2011/6;43(6):1275-1284.

White BA, Gomez AM, Ho M, Berg Miller M, Thomas SM, Yeoman CJ, Yildirim S, Creedon DJ, Goldberg TL, Leigh SR, Nelson KE, Stumpf RM, Wilson BA. 2011. Comparative analysis of the vaginal microbiome in health and disease. Genome Biol. 2011 Sep 19;12(1):I17.

back to top

Invited Talks

Gomez AM. 2017. The gut microbiome in health and evolution. National Univ. of Colombia, Medellin, Colombia. March 2017.

Gomez AM. 2017. Host-microbe interactions in the primate gut: Implications for human origins. Amer. Assoc. for Physical Anthropol., New Orleans, LA. April 2017.

Gomez AM. 2017. Loss of gut microbiome diversity in industrialized societies: Alternative views. Microbiome and Health Symposium-Vidarium, Medellin, Colombia. March 2017.

Gomez AM. 2017. Meta-OMIC reconstruction in the gut microbiome of wild primates: Implication for human origins. qPCT dPCR and NGS: Liquid Biopsy, Integrative Big Data Analysis, Signature…and beyond. 8th Int. Gene QuantificatIon Event Symposium, Tech. Univ. of Munich, Germany. April 2017.

Gomez AM. 2017. Meta-OMIC reconstruction of the primate gut: Understanding the human microbiome. Midwest Primate Interest Group, Northwestern Univ., Evanston, IL. Oct.

Gomez AM. 2015. The primate gut microbiome: From host ecology to human health and evolution. J. Craig Venter Institute. August 2015.

Gomez AM. 2015. The primate gut microbiome: From host ecology to human health and evolution. State Univ. of New York, SUNY-Buffalo. January 2015.

Gomez AM. 2014. Keynote talk: A meta-“OMICS” systems approach to microbial community studies in non-human primates. Primate Parasitology Symposium: Development, Methods and Future. Univ. of Vet. and Pharmaceut. Sci., Brno, Czech Republic. June 2014.

back to top