Yang Da - Publications

Refereed Journal Articles

Garbe, J.R., D. Prakapenka, C. Tan, and Y. Da. 2016. Genomic inbreeding and relatedness in wild panda populations. PLoS ONE 11(8): e0160496. doi:10.1371/journal.pone.0160496.
URL: http://journals.plos.org/plosone/article?id=10.1371%2Fjournal.pone.0160496

Da, Y. 2015. Multi-allelic haplotype model based on genetic partition for genomic prediction and variance component estimation using SNP markers. BMC Genetics 2015, 16:144. DOI: 10.1186/s12863-015-0301-1.
URL: http://bmcgenet.biomedcentral.com/articles/10.1186/s12863-015-0301-1

Ma, L., J.R. O'Connell, P.M. VanRaden, B. Shen, A. Padhi, C. Sun, D.M. Bickhart, J.B. Cole, D.J. Null, G.E. Liu, Y. Da, and G.R. Wiggans. 2015. Cattle sex-specific recombination and genetic control from a large pedigree analysis. PLoS Genetics 11(11): e1005387. doi:10.1371/journal.pgen.1005387
URL: http://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1005387

Da, Y., C. Wang, S. Wang, and G. Hu. 2014. Mixed model methods for genomic prediction and variance component estimation of additive and dominance effects using SNP markers. PLoS ONE 2014, 9(1): e87666. doi:10.1371/journal.pone.0087666. 
URL: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0087666

Feng, C., Y. Gao, B. Dorshorst, C. Song, X. Gu, Q. Li, J. Li, T. Liu, C-J. Rubin, Y. Wang, J. Fei, H. Li, K. Chen, H. Qu, D. Shu, C. Ashwell, Y. Da, L. Andersson, X. Hu, and N. Li. 2014. A cis-regulatory mutation of PDSS2 causes silky-feather in chickens. PLoS Genet. 10(8): e1004576. doi:10.1371/journal.pgen.1004576.
URL:  http://www.plosgenetics.org/article/info%3Adoi%2F10.1371%2Fjournal.pgen.1004576

Hu, G., C. Wang, and Y. Da. 2014. Genomic heritability estimation for the early life-history transition related to propensity to migrate in wild rainbow and steelhead trout populations. Ecology and Evolution. doi: 10.1002/ece3.1038.
URL: http://onlinelibrary.wiley.com/doi/10.1002/ece3.1038/full

Wang, C., and Y. Da. 2014. Quantitative genetics model as the unifying model for defining genomic relationship and inbreeding coefficient. PLoS ONE 9(12): e114484. doi:10.1371/journal.pone.0114484.
URL: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0114484

Wang, C., D. Prakapenka, S. Wang, S. Pulugurta, H.B. Runesha, and Y. Da. 2014. GVCBLUP: A computer package for genomic prediction and variance component estimation of additive and dominance effects. BMC Bioinformatics 15:270. DOI: 10.1186/1471-2105-15-270.
URL: http://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-15-270

Kim, E-S., J.B. Cole, H. Huson, G.R. Wiggans, C.P. Van Tassell, B.A. Crooker, G. Liu, Y. Da, and T.S. Sonstegard. 2013. Effect of artificial selection on runs of homozygosity in U.S. Holstein cattle. PLoS ONE 2013, 8(11): e80813. doi:10.1371/journal.pone.0080813
URL: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0080813

Ma, L., G.R. Wiggans, S. Wang, T.S. Sonstegard, J. Yang, B.A. Crooker, J.B. Cole, C.P Van Tassell, T.J. Lawlor, and Y. Da. 2012. Effect of sample stratification on dairy GWAS results. BMC Genomics 2012, 13:536.
URL: http://www.biomedcentral.com/1471-2164/13/536

Wang, S., D. Dvorkin, and Y. Da. 2012. SNPEVG: A graphical tool for GWAS graphing with mouse clicks. BMC Bioinformatics 2012, 13:319.
URL: http://www.biomedcentral.com/1471-2105/13/319/

Xie, L., C. Luo, C. Zhang, R. Zhang, J. Tang, Q. Nie, L. Ma, X. Hu, N. Li, Y. Da, and X. Zhang. 2012. Genome-wide association study identified a narrow chromosome 1 region associated with chicken growth traits. PLoS ONE 2012, 7(2):e30910.
URL: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0030910

Zhang, H., S.Z. Wang, Z.P. Wang, Y. Da, N. Wang, X.X. Hu, Y.D. Zhang, Y.X. Wang, L. Leng, Z.Q. Tang, and H. Li. 2012. A genome-wide scan of selective sweeps in two broiler chicken lines divergently selected for abdominal fat content. BMC Genomics 2012, 13:704.
URL: http://www.biomedcentral.com/1471-2164/13/704

Zhang, H., X. Hu, Z. Wang, Y. Zhang, S. Wang, Y. Zhang, S. Wang, N. Wang, L. Ma, L. Leng, S. Wang, Q. Wang, Y. Wang, Z. Tang, N. Li, and Y. Da. 2012. Selection signature analysis implicates the PC1/PCSK1 region for chicken abdominal fat content. PLoS ONE 2012 7(7): e40736. doi:10.1371/journal.pone.0040736.
URL: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0040736

Cole, J.B., G.R. Wiggans, L. Ma, T.S. Sonstegard, T.J. Lawlor, B.A. Crooker, C.P. Van Tassell, J. Yang, S. Wang, L.K. Matukumalli, and Y. Da. 2011. Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary U.S. Holstein cows. BMC Genomics 2011, 12(1):408.
URL: http://www.biomedcentral.com/1471-2164/12/408

Gu, X., C. Feng, L. Ma, C. Song, Y. Wang, Y. Da, H. Li, K. Chen, S. Ye, and C. Ge. 2011. Genome-wide association study of body weight in chicken F2 resource population. PLoS ONE 2011, 6(7):e21872.
URL: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0021872

Ma, L., S. Han, J. Yang, and Y. Da. 2010. Multi-locus test conditional on confirmed effects leads to increased power in genome-wide association studies. PLoS ONE 2010, 5(11):e15006.
URL: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0015006

Ma, L., J. Yang, H.B. Runesha, T. Tanaka, L. Ferrucci, S. Bandinelli, and Y. Da. 2010. Genome-wide association analysis of total cholesterol and high-density lipoprotein cholesterol levels using the Framingham Heart Study data. BMC Medical Genetics 2010, 11(1):55.
URL: http://www.biomedcentral.com/1471-2350/11/55

Ma, L., H.B. Runesha, D. Dvorkin, J.R. Garbe, and Y. Da. 2008. Parallel and serial computing tools for testing single-locus and epistatic SNP effects of quantitative traits in genome-wide association studies. BMC Bioinformatics 2008, 9(1):315.
URL: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2503991/

Ma, L., D. Dvorkin, J.R. Garbe, and Y. Da. 2007. Genome-wide analysis of single-locus and epistasis single-nucleotide polymorphism effects on anti-cyclic citrullinated peptide as a measure of rheumatoid arthritis. BMC Proceedings 2007, 1(Suppl 1):S127
URL: http://www.biomedcentral.com/1753-6561/1/S1/S127

Mao, Y., N.R. London, L. Ma, D. Dvorkin, and Y. Da. 2006.  Detection of SNP epistasis effects of quantitative traits using an extended Kempthorne model. Physiological Genomics 2006, 28(1):46-52.
URL: http://physiolgenomics.physiology.org/content/28/1/46.full

Mao, Y., and Y. Da. 2005. Statistical power for detecting epistasis QTL effects under the F-2 design. Genetics Selection Evolution 2005, 37(2):129-150.
URL: http://www.biomedcentral.com/content/pdf/1297-9686-37-3-129.pdf

Da, Y. 2003. Statistical analysis and experimental design for mapping genes of complex traits in domestic animals. Acta Genetica Sinica 2003, 30(12):1183-1192.

Garbe, J., and Y. Da. 2003. A software tool for the graphical visualization of large and complex populations. Acta Genetica Sinica 2003, 30(12):2293-2295.

London, N.R., J.R. Garbe, S.M. Schmutz, M.S. Abrahamsen, and Y. Da. 2003. Linkage analysis for mapping genes of sex-influenced traits. Mammalian Genome 2003, 14(4):261-267.

Da, Y., J. Garbe, N. London, and J. Xu. 2002. Linkage analysis using direct and indirect counting and relative efficiencies for codominant and dominant loci. J. Animal Sci. 2002, 80(10):2528.

Da, Y., P.M. VanRaden, and L.B. Schook. 2000. Detection and parameter estimation for quantitative trait loci using regression models and multiple markers. Genetics, Selection, Evolution 2000, 32:357-381.

back to top

Invited Papers, Proceedings, Presentations, Research Reports

Da, Y., C. Wang, C. Tan, D. Prakapenka, M. Shigematsu, J. Garbe, and L. Ma. 2015. Multi-allelic haplotype model to integrate functional genomic information with genomic prediction and variance component estimation. Poster Presentation. Plant and Animal Genome Conf., San Diego, CA. Jan. 11.

Sonstegard, T., L. Ma, E-S. Kim, C. Van Tassell, G. Wiggans, B. Crooker, J. Cole, G. Liu, S. Fahrenkrug, A. Ponce de León, and Y. Da. 2015. Genome changes due to forty years of artificial selection associated with divergent dairy production and reproduction. Invited Presentation. Cattle/Sheep/Goat Workshop 2. 2015 Plant and Animal Genome Conf., San Diego, CA. Jan. 11.

Gu, X., J.R. Garbe, C. Luo, Z. Sheng, H. Qu, X. Zhang, D. Shu, N. Li, Y. Da, and X. Hu. 2014. Linkage analysis to improve the chicken genome assembly. 34th Internatl. Soc. for Anim. Genetics Conf. Poster presentation.

Hu, Z-L., J.R. Garbe, J.M. Reecy, M.F. Rothschild, Y. Da, and J.C.M. Dekkers. 2014. Linkage analysis to improve the swine genome assembly. 34th Internatl. Soc. for Anim. Genetics Conf. Poster presentation.

Wang, C., D. Prakapenka, H.B. Runesha, and Y. Da. 2014. Parallel computing for mixed model implementation of genomic prediction and variance component estimation of additive and dominance effects. 10th World Congr. of Genetics Applied to Livestock Prod., Vancouver, Canada. Aug. 17-22. Oral and poster presentations.
URL: https://www.asas.org/docs/default-source/wcgalp-proceedings-oral/158_paper_8748_manuscript_1615_0.pdf?sfvrsn=2

Da, Y. 2011. Quantitative genetics: A bridge between theory, practice and technology. Contributed paper to the Symposium on Animal Breeding and Genetics in Honor of Professor Wu Zongxian's 100th Birthday, China Agricultural University, May 2011.

Cole, J.B., G.R. Wiggans, L. Ma, T.A. Sonstegard, B.A. Crooker, C.P. Van Tassell, J. Yang, L.K. Matukumalli, and Y. Da. 2010. High resolution QTL maps of 31 traits in contemporary U.S. Holstein cows. Proc. 9th World Congr. Genet. Appl. Livest. Prod., Leipzig, Germany, Aug. 1–6. Comm. 464, 4 p.

Sonstegard, T.S., L. Ma, C.P. Van Tassell, E-S. Kim, J.B. Cole, G.R. Wiggans, B.A. Crooker, B.D. Mariani, L.K. Matukumalli, J.R. Garbe, S.C. Fahrenkrug, G. Liu, and Y. Da. 2010. Forty years of artificial selection in U.S. Holstein cattle had genome-wide signatures. Poster presentation at 9th World Congr. Genet. Appl. Livest. Prod., Leipzig, Germany, Aug. 1-6. Comm. 464, 4 pp.

Da, Y. 2009. Genome changes due to 40 years of artificial selection and genome-wide association study in U.S. Holstein cattle. Workshop on Holstein Management and Breeding, Hohhot, Inner Mongolia, China. Aug. 14-15.

Da, Y. 2009. Genome-wide association analysis. Animal Science Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, China. Aug. 11.

Ma, L., D. Dvorkin, J.R. Garbe, and Y. Da. 2007. Genome-wide analysis of single-locus and epistasis SNP effects on anti-cyclic citrullinated peptide as a measure of rheumatoid arthritis. BMC Proceedings:1(Suppl. 1):S127.

London, N. and Y. Da. 2006. Statistical power and sample size requirement for QTL detection. Proc. 8th World Congress on Genetics Applied to Livestock Production, edited by B.D. Valente, O. Rossi de Morais, and R.V. Ventura. Belo Horizonte, Brazil: Instituto Prociência. Vol. 22: Article #18.

Ma, L., D. Dvorkin, and Y. Da. 2006. Genome-wide analysis of single-locus and epistasis SNP effects on anti-cyclic citrullinated peptide. In: Participant Contributions, Genetic Analysis Workshop 15, pp. 13-54 ~ 13-56. St. Petersburg Beach, FL. Nov. 12-15.

Mao, Y. and Y. Da. 2006. Statistical power and sample size for QTL detection using flanking markers under the f-2 design. Proc.  8th World Congress on Genetics Applied to Livestock Production, edited by B.D. Valente, O. Rossi de Morais, and R.V. Ventura. Belo Horizonte, Brazil: Instituto Prociência. Vol. 23: Article #19.

Da, Y., N. London, and J. Xu. 2002. Partition of genotypic variance for two linked loci under the F-2 design for QTL mapping. Proc. 7th World Cong. Genet. Appl. Livest. Prod., Montpellier, France 32: 737-740.

London, N., J. Xu, J. Garbe, and Y. Da. 2002. Linkage analysis for the hypothesized interaction between the polled and scurred traits in cattle. Proc. 7th World Cong. Genet. Appl. Livest. Prod., Montpellier, France 29: 485-488.

Xu, J., N. London, J. Garbe, and Y. Da. 2002. Bias in linkage analysis due to ignoring epistasis effects. Proc. 7th World Cong. Genet. Appl. Livest. Prod., Montpellier, France 32: 633-636.

Da, Y. 2001. Partitioning of genotypic value and variance for two quantitative trait loci with linkage. Symposium on Animal Breeding and Genetics in Honor of Professor Wu Zongxian's 90th Birthday, pp. 59-67, China Agricultural University, May 11-12.

Da, Y., T. Sonstegard, B. Crooker, L. Hansen, H. Chester-Jones, M. Fahning, B. Seguin, G. Marx, G.C. Lamb, and F.A. Ponce de León. 2000. Designs of resource populations for dairy QTL mapping. W.E. Petersen Lecture. Dairy Genomics: Trends and Opportunities. University of Minnesota, St. Paul, MN. Dec. 11-12.

Da, Y., M. Ron, A. Yanai, M. Band, R.E. Everts, D.W. Heyen, J.I. Weller, G.R. Wiggans, and H.A. Lewin. 1994. The dairy bull DNA repository: A resource for mapping quantitative trait loci. 5th Congress of Genetics Applied to Livestock Production. 21:229-232.

back to top

Books, Textbooks, Monographs

Da, Y. 2012. Mixed Model Methods for Genetic Analysis. AnSc 8141 supplementary classnotes, 2 credits, 75 pages plus instructor's computer programs and in-class derivations. Department of Animal Science, University of Minnesota.

Wang, S., L. Ma, and Y. Da. 2012. AGDP: A software tool for the analysis of genome differences between populations. User manual version 21.1, 18 pages. Department of Animal Science, University of Minnesota.

Wang, S., D. Dvorkin, and Y. Da. 2012. SNPEVG: a graphical tool for SNP effect viewing and graphing. User manual version 3.1, 41 pages. Department of Animal Science, University of Minnesota. http://animalgene.umn.edu

Ma, L., J. Garbe, H.B. Runesha, and Y. Da. 2011. epiSNP: a computer package of parallel and serial computing programs for single-locus and epistasis testing in genome-wide association studies. User manual version 4.2, 22 pages. Department of Animal Science, University of Minnesota.

Da, Y. 2007. Statistical Genetics and Genomics. Department of Animal Science, University of Minnesota.

Ma, L., D. Dvorkin, and Y. Da. 2006. EpiSNP User Manual Version 1.0w. Department of Animal Science, University of Minnesota.
http://animalgene.umn.edu.

Garbe, J.R. and Y. Da. 2005. Pedigraph user manual Version 2.2. Department of Animal Science, University of Minnesota.
http://animalgene.umn.edu

back to top

Computer Programs

back to top

Garbe, J.R. and Y. Da. 2004. MiniInbred, a computer program to minimize inbreeding in breeding plans.
http://animalgene.umn.edu

Garbe, J.R. and Y. Da. 2004. Pedigraph 2.0, a computer program for pedigree/genealogy visualization of large, complex pedigrees.
http://animalgene.umn.edu

back to top

Abstracts

Da, Y., C. Wang, C. Tan, D. Prakapenka, M. Shigematsu, J.R. Garbe, and L. Ma. 2015. Multi-allelic haplotype model to integrate functional genomic information with genomic prediction and estimation. Plant and Anim. Genome XXIII, San Diego, CA. Jan. 10-14. Abstr. P1176.
URL: https://pag.confex.com/pag/xxiii/webprogram/Paper14435.html

Ma, L., T.S. Sonstegard, C.P. VanTassell, J.B. Cole, G.R. Wiggans, B.A. Crooker, F.A. Ponce de, and Y. Da. 2015. Selection signature analysis in Holstein cattle identified genes known to affect reproduction. ADSA/ASAS 2015, Orlando, FL, July 12-16. Abstr. T102.
URL: http://m.jtmtg.org/abs/t/64127

Tan, C., D. Prakapenka, C. Wang, L. Ma, J.R. Garbe, and Y. Da. 2015. Integration of haplotype analysis of functional genomic information with single SNP analysis improved accuracy of genomic prediction. ADSA/ASAS 2015, Orlando, FL, July 12-16. Abstr. M84.
URL:  http://m.jtmtg.org/abs/t/65063

Tan, C., J. Ren, Z. Huang, Y. Zhao, Y. D., X. Hu. 2015. An improved approach for swine SNP genotyping using Genotyping-by-Sequencing. ADSA/ASAS 2015, Orlando, FL, July 12-16. Abstract M78. http://m.jtmtg.org/abs/t/65275

Cole, J.B., T.S. Sonstegard, L. Ma, G. R. Wiggans, B.A. Crooker, C.P. Van Tassell, J. Yang, L.K. Matukumalli, and Y. Da. 2010. High resolution QTL map of net merit component traits and calving traits from genome-wide association analysis in contemporary U.S. Holstein cows. Abstract and Poster #P565 at Plant and Animal Genome XVIII, San Diego, CA. Jan. 9-13.

Ma, L., T.S. Sonstegard, J.B. Cole, G.R. Wiggans, B.A. Crooker, C.P. Van Tassell, J. Yang, L.K. Matukumalli, and Y. Da. 2010. X chromosome SNPs were heavily involved in epistasis effects of net merit component traits in contemporary U.S. Holstein cows. Abstract and Poster #P542 at Plant and Animal Genome XVIII, San Diego, CA. Jan. 9-13.

Wiggans, G.R., L. Ma , T.S. Sonstegard, J.B. Cole, B.A. Crooker, C.P. Van Tassell, J. Yang, L.K. Matukumalli, and Y. Da. 2010. High resolution QTL map of body conformation traits from genome-wide association analysis in contemporary U.S. Holstein cows. Abstract and Poster #P547 at Plant and Animal Genome XVIII, San Diego, CA. Jan. 9-13.

Ma, L., T.S. Sonstegard, J.B. Cole, G.R. Wiggans, B.A. Crooker, C.P. Van Tassell, and Y. Da. 2009. Preliminary results of genome-wide association analysis of nine traits in Holstein Cows. Poster Presentation at Symposium on Statistical Genetics of Livestock for the Post-Genomic Era, Madison, WI. May 4-6.

Sonstegard, T.S. L. Ma, J.B. Cole, G.R. Wiggans, B.A. Crooker, C.P. Van Tassell, B.D. Mariani, and Y. Da. 2009. Genome signature of artificial selection for milk yield in Holstein cattle. Abstract and Poster Presentation at Plant and Animal Genome XVII, San Diego, CA. Jan. 10-14.

Sonstegard, T.S., L. Ma, J.B. Cole, G.R. Wiggans, B.A. Crooker, C.P. Van Tassell, B.D. Mariani, P.M. Van Raden, M.V. da Silva, and Y. Da. 2008. Genomic signatures of artificial selection in U.S. Holstein cows. (Oral and Poster Presentation.) Conf. International Society of Animal Genetics, Amsterdam, The Netherlands. July 20-24.

Duan, Y., J. Garbe, N. London. L. Ma, and Y. Da. 2006. A computer program for detecting additive, dominance, imprinting, sex-influenced and the overall QTL effects. Abstract #32, Joint Ann. Mtg. of American Dairy Sci. Assoc. and American Animal Sci. Assoc., Minneapolis, MN.

Ma, L., D. Dvorkin, and Y. Da. 2006. Large scale SNP epistasis detection of complex traits using pairwise epistasis tests. IGES 15th Ann. Mtg., St. Pete Beach, FL. Nov. 16-17. p. 55.

Da, Y. and Y. Mao. 2005. Detection of epistasis effects of biallelic candidate genes of complex traits. Program and Abstract Book, p.55, Human Genome Meeting, Tokyo. April 18-21.

Garbe, J.R. and Y. Da. 2004. A computerized approach to minimize inbreeding of breeding plans. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 376.

Garbe, J.R. and Y. Da. 2004. Graphical visualization of two large complex populations using Pedigraph 2.0. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 377.

Garbe, J.R. and Y. Da. 2004. Pedigraph 2.0 - A software tool for the graphing and analysis of large complex pedigrees. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 242.

London, N.R. and Y. Da. 2004. Statistical methods to detect imprinted QTL with gender specific recombination frequencies. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 416.

Mao, Y. and Y. Da. 2004. Statistical power for detecting epistasis QTL effects under the F-2 Design. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 414.

Xu, J., J.R. Garbe, N.R. London, Y. Mao, and Y. Da. 2004. Evaluation of three statistical methods for QTL analysis. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 243.

Garbe, J.R. and Y. Da. 2003. Genealogy graphing for large complex populations: the example of European royal genealogy data. Journal of American Human Genetics, Supplement to Vol. 73, p. 605, 53rd Annual Meeting of the American Society of Human Genetics.

Garbe, J. and Y. Da. 2003. Pedigraph, a software tool for the graphical visualization of large complex pedigrees. Final Abstracts Guide, p. 293. Plant and Animal Genome XI, San Diego, CA. Jan. 11-15.

Garbe, J., N. London, and Y. Da. 2003. Locusmap, a linkage map construction tool for loci with various inheritance modes. Final Abstracts Guide, p. 305. Plant and Animal Genome XI, San Diego, CA. Jan. 11 15.

London, N.R. and Y. Da. 2003. Optimum marker spacing for QTL detection. Journal of American Human Genetics, Supplement to Vol. 73, p. 615, 53rd Annual Meeting of the American Society of Human Genetics.

London N. and Y. Da. 2003. Statistical power for detecting additive and dominance QTL effects under the reciprocal backcross and F-2 designs. Final Abstracts Guide, p. 254. Plant and Animal Genome XI, San Diego, CA. Jan. 11-15.

Xu, J. and Y. Da. 2003. Genetic sampling and chiasm interference affect QTL mapping accuracy. J. of American Human Genetics, Supplement to Vol. 73, p. 617, 53rd Annual Meeting of the American Society of Human Genetics.

Chrystal, M.A., Y. Da, L.B. Hansen, and A.J. Seykora. 2001. Accuracy of marker assisted selection using a mixed model method. Abstract book, p. 191, International Animal Agriculture and Food Science Conference, Indianapolis, IN. July 24-28.

Da, Y. 2001. A rapid method for linkage analysis using direct and indirect counting. In: Final Abstracts Guide, p. 151. Plant and Animal Genome IX, San Diego, CA. Jan. 14-17.

Da, Y. 2001. Parameter estimation of epistasis effects using orthogonal marker contrasts. Abstract book, p. 191, International Animal Agriculture and Food Sci. Conf., Indianapolis, IN. July 24-28.

Xu, J. and Y. Da. 2001. A heterogeneity model for estimating the number of alleles of a quantitative trait locus. Abstract book, p. 340, International Animal Agriculture and Food Sci. Conf., Indianapolis, IN. July 24-28.

Xu, J. and Y. Da. 2001. Inversion-free method for variance component estimation under the animal model. Abstract book, p. 341, International Animal Agriculture and Food Science Conference, Indianapolis, IN. July 24-28.

Chrystal, M.A., Y. Da, L.B. Hansen, and A.J. Seykora. 2000. A mixed model method for QTL detection and marker assisted selection. In: Conference Abstract Book, p. 9, ISAG 2000, 27th International Conference on Animal Genetics, Minneapolis, MN. July 22-26.

Da, Y. 2000. Detection and parameter estimation for dominance effects of quantitative trait loci. In: Conference Abstract Book, p. 5, ISAG 2000, 27th International Conference on Animal Genetics, Minneapolis, MN. July 22-26.

back to top

Theses

London, N.R. 2004. Statistical theory and methods for mapping gender-affected genes and quantitative trait loci. Ph.D. Thesis. Department of Animal Science and Program in Molecular Veterinary Bioscience, University of Minnesota.

Xu, J. 2004. Statistical analysis for mapping linked quantitative trait loci. Ph.D. Thesis. Department of Animal Science, University of Minnesota.

Chrystal, M.A. 2003. Marker assisted selection in dairy cattle using a mixed model approach. Ph.D. Thesis. Department of Animal Science, University of Minnesota.

back to top