Yang Da
Associate Professor
Quantitative and Molecular Genetics
Publications (continued)
- Refereed Articles -
Ashwell, M.S., D.W. Heyen, T.S. Sonstegard, C.P. Van Tassell, Y. Da, P.M. VanRaden, M. Ron, J.I. Weller, and H.A. Lewin. 2004. Detection of quantitative trait loci affecting milk production, health, and reproductive traits in Holstein cattle. J. Dairy Sci. 87:468-475.
Da, Y. 2003.
Statistical methods and experimental designs for mapping genes
of complex traits in domestic animals. Acta Genetica Sinica
30:1183-1192.
Garbe, J.R. and Y. Da. 2003. A software tool for the graphical visualization
of large and complex populations. Acta Genetica Sinica 30: 2293-2295.
London,
N.R, J.R. Garbe, S.M. Schmutz, M.S. Abrahamsen, and Y. Da.
2003. Linkage analysis for mapping genes of sex-influenced traits.
Mammalian Genome 14:261-267.
Patterson,
E.E., J.R. Mickelson, Y. Da, M.C. Roberts, A. McVey, D. O'Brien,
G. Johnson, and P.J. Armstrong. 2003. Clinical characteristics
and inheritance of idiopathic epilepsy in Vizslas. J. Vet. Internal
Medicine 17:319-325.
Reed, K.M., L.D. Chaves, J.R. Garbe, Y. Da, and D.E. Harry. 2003.
Allelic variation and genetic linkage of avian microsatellites
in a new turkey population for genetic mapping. Cytogenetics
and Genome Res. 102:331-339.
Da, Y.,
J. Garbe, N. London, and J. Xu. 2002. Linkage analysis using
direct and indirect counting and relative efficiencies for codominant
and dominant loci. J. Animal Sci. 80:2528-2539.
Braunschweig, M.H., A.A. Paszek, J.I. Weller, Y. Da, R.J. Hawken, M.B. Wheeler, L.B. Schook, and L.J. Alexander. 2001. Generation and exploration of a dense genetic map in a region of a QTL affecting corpora lutea in a Meishan × Yorkshire cross. Mammalian Genome 12:719-723.
Da, Y., P.M. VanRaden, and L.B. Schook. 2000. Detection and parameter estimation for quantitative trait loci using regression models and multiple markers. Genetics, Selection, Evolution 32: 357-381.
Da Y., P.M. VanRaden, N. Li, J.I. Weller, L.B. Schook, and C.W. Beattie.
1999. Designs of resource families for mapping quantitative
trait loci using genetic markers in domestic animals, J. Agricultural
Biotech. (Suppl.) 15-28.
Heyen, D.W., J.I. Weller, M. Ron, M. Band J.E. Beever, E. Feldmesser,
Y. Da, G.R. Wiggans, P.M. VanRaden, and H.A. Lewin. 1999.
A genome scan for quantitative trait loci influencing milk production
and health traits in dairy cattle. Physiological Genomics 1:165-175.
Da, Y.,
P.M. VanRaden, N. Li, C.W. Beattie, C. Wu, and L.B. Schook.
1998. Designs of reference families for the construction of
genetic linkage maps. Animal Biotechn. 9:205-228.
Da, Y.,
V.L. Jarrell, T. Wang, R.L. Fernando, M.B. Wheeler, and H.A. Lewin. 1995. A multilocus ordering strategy for gene-centromere
mapping using oocytes and polar bodies. Genetics. 139:1091-1097.
Da, Y. and
H.A. Lewin. 1995. Linkage information content and efficiency
of fullsib and halfsib designs for gene mapping. Theoretical
and Applied Genetics. 90:699-706.
- Invited Papers, Conference Proceedings, Research Reports -
Da,
Y., N. London, and J. Xu. 2002. Partition of genotypic
variance for two linked loci under the F-2 design for
QTL mapping. Proc. 7th World Cong. Genet. Appl. Livest.
Prod., Montpellier, France 32: 737-740.
London,
N., J. Xu, J. Garbe, and Y. Da. 2002. Linkage analysis
for the hypothesized interaction between the polled
and scurred traits in cattle. Proc. 7th World Cong.
Genet. Appl. Livest. Prod., Montpellier, France 29:
485-488.
Xu,
J., N. London, J. Garbe, and Y. Da. 2002. Bias in linkage
analysis due to ignoring epistasis effects. Proc. 7th
World Cong. Genet. Appl. Livest. Prod., Montpellier,
France 32: 633-636.
Da, Y. 2001. Partitioning of genotypic value and variance for two quantitative trait loci with linkage. Symposium on Animal Breeding and Genetics in Honor of Professor Wu Zongxian's 90th Birthday, pp. 59-67, China Agricultural University, May 11-12, 2001.
Da, Y., T. Sonstegard, B. Crooker, L. Hansen, H. Chester-Jones, M. Fahning, B. Seguin, G. Marx, G.C. Lamb, and F.A. Ponce de León. 2000. Designs of resource populations for dairy QTL mapping. W.E. Petersen Lecture. Dairy Genomics: Trends and Opportunities. University of Minnesota, St. Paul, December 11-12, 2000.
Da, Y.,
M. Ron, A. Yanai, M. Band, R.E. Everts, D.W. Heyen, J.I.
Weller, G.R. Wiggans, and H.A. Lewin. 1994. The dairy bull
DNA repository: A resource for mapping quantitative trait loci.
The 5th Congress of Genetics Applied to Livestock Production.
21:229-232.
- Computer Programs -
Garbe, J.R. and Y. Da. 2004. MiniInbred, a computer program to minimize inbreeding in breeding plans. (http://animalgene.umn.edu)
Garbe, J.R. and Y. Da. 2004. Pedigraph 2.0, a computer program for pedigree/genealogy visualization of large, complex pedigrees. (http://animalgene.umn.edu)
- Abstracts -
Garbe, J.R. and Y. Da. 2004. A computerized approach to minimize inbreeding of breeding plans. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 376.
Garbe, J.R. and Y. Da. 2004. Graphical visualization of two large complex populations using Pedigraph 2.0. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 377.
Garbe, J.R. and Y. Da. 2004. Pedigraph 2.0 - A software tool for the graphing and analysis of large complex pedigrees. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 242.
London, N.R. and Y. Da. 2004. Statistical methods to detect imprinted QTL with gender specific recombination frequencies. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 416.
Mao, Y. and Y. Da. 2004. Statistical power for detecting epistasis QTL effects under the F-2 Design. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 414.
Xu, J., J.R. Garbe, N.R. London, Y. Mao, and Y. Da. 2004. Evaluation of three statistical methods for QTL analysis. ADSA-ASAS-PSA Joint Annual Meeting, St. Louis, MO. July 25-29. p. 243.
Garbe, J.R. and Y. Da. 2003. Genealogy graphing for large complex populations:
the example of European royal genealogy data. Journal of American
Human Genetics, Supplement to Vol. 73, p. 605, 53rd Annual Meeting
of the American Society of Human Genetics.
Garbe, J.
and Y. Da. 2003. Pedigraph, a software tool for the graphical
visualization of large complex pedigrees. Final Abstracts Guide,
p. 293. Plant and Animal Genome XI, San Diego, USA, January 11-15,
2003.
Garbe, J.,
N. London, and Y. Da. 2003. Locusmap, a linkage map construction
tool for loci with various inheritance modes. Final Abstracts
Guide, p. 305. Plant and Animal Genome XI, San Diego, USA, January
11 15, 2003.
London,
N.R. and Y. Da. 2003. Optimum marker spacing for QTL detection.
Journal of American Human Genetics, Supplement to Vol. 73, p.
615, 53rd Annual Meeting of the American Society of Human Genetics.
London N.
and Y. Da. 2003. Statistical power for detecting additive and
dominance QTL effects under the reciprocal backcross and F-2
designs. Final Abstracts Guide, p. 254. Plant and Animal Genome
XI, San Diego, USA, January 11-15, 2003.
Xu, J. and
Y. Da. 2003. Genetic sampling and chiasm interference affect
QTL mapping accuracy. J. of American Human Genetics, Supplement
to Vol. 73, p. 617, 53rd Annual Meeting of the American Society
of Human Genetics.
Chrystal, M.A., Y. Da, L.B. Hansen, and A.J. Seykora. 2001. Accuracy of marker assisted selection using a mixed model method. Abstract book, p. 191, International Animal Agriculture and Food Science Conference, Indianapolis, July 24-28, 2001.
Da, Y. 2001. A rapid method for linkage analysis using direct and indirect counting. In: Final Abstracts Guide, p. 151. Plant and Animal Genome IX, San Diego, USA, January 14-17, 2001.
Da, Y. 2001. Parameter estimation of epistasis effects using orthogonal marker contrasts. Abstract book, p. 191, International Animal Agriculture and Food Science Conference, Indianapolis, July 24-28, 2001.
Xu, J. and Y. Da. 2001. A heterogeneity model for estimating the number of alleles of a quantitative trait locus. Abstract book, p. 340, International Animal Agriculture and Food Sci. Conf., Indianapolis, July 24-28, 2001.
Xu, J. and Y. Da. 2001. Inversion-free method for variance component estimation under the animal model. Abstract book, p. 341, International Animal Agriculture and Food Science Conference, Indianapolis, July 24-28, 2001.
Chrystal, M.A., Y. Da, L.B. Hansen, and A.J. Seykora. 2000. A mixed model method for QTL detection and marker assisted selection. In: Conference Abstract Book, p. 9, ISAG 2000, 27th International Conference on Animal Genetics, Minneapolis, MN, USA, July 22-26, 2000.
Da, Y. 2000. Detection and parameter estimation for dominance effects of quantitative trait loci. In: Conference Abstract Book, p. 5, ISAG 2000, 27th International Conference on Animal Genetics, Minneapolis, MN, USA, July 22-26, 2000.
- Theses -
London, N.R.
2004. Statistical theory and methods for mapping
gender-affected genes and quantitative trait loci. Ph.D. Thesis.
Department of Animal Science and Program in Molecular Veterinary Bioscience,
University of Minnesota.
Xu, J. 2004.
Statistical analysis for mapping linked quantitative trait loci. Ph.D. Thesis. Department of Animal Science, University of Minnesota.
Chrystal, M.A. 2003. Marker assisted selection in dairy cattle using a mixed model approach. Ph.D. Thesis. Department of Animal Science, University of Minnesota.
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